A revision history for the R package 'linkcomm'.

Author: Alex T. Kalinka (alex.t.kalinka@gmail.com).




linkcomm 1.0-6
==============

- Improved memory usage during the calculation of link densities.

- Added "node.pies" argument to "plotLinkCommGraph" to enable the visualization of nodes as pie charts of edge community membership.

- Included "edge.duplicates" function that finds loops, duplicate and bi-directional edges using a C++ function.

- Added "dist" argument to "getLinkCommunities" to allow the user to specify their own distance matrix.

- Fixed a bug that prevented link dendrograms from rendering correctly when trivial clusters are included.

- Fixed a bug that that led to summary plots rendering incorrectly if plotted sequentially on the same graphics device.

- Modified "plotOCGraph" so that node labels overlay node symbols.

- Changed Windows progress indicators to percentages.

- Updated vignette documentation to highlight node pie plots.



linkcomm 1.0-5
==============

- Added functions "getOCG.clusters", "plot.OCG", "read.OCG", "print.OCG", "numberEdgesIn", and "which.communities" to enable a port of the Overlapping Cluster Generator (OCG) algorithm into the linkcomm package.

- Fixed a bug that prevented linkcomm summary plots from rendering correctly on different sized graphics devices.

- Updated the vignette documentation to include information on the OCG algorithm and how to use it.

- Changed dependency from "igraph" to "igraph0" to avoid incompatibilites, and included "utils" in the imported package list.



linkcomm 1.0-4
==============

- Added functions "getEdgesIn" and "graph.feature" and modified "getNodesIn" to allow customization of network visualizations.

- Added "verbose" option to "getLinkCommunities", "plotLinkCommDend", and "plotLinkCommSummary".

- Added "directed" logical component to the "linkcomm" object.

- Fixed a bug that led to loss of the partition density axis in "summary" plots.

- Fixed a bug that prevented the correct colouring of dendrograms when several clusters merge at the same height.

- Updated vignette and manual documentation.



linkcomm 1.0-3
==============

- Fixed bug that prevented partition density summary plots from being saved correctly as PDFs or other file types.

- Updated citation information.

- Updated documentation.



linkcomm 1.0-2
==============

- Fixed Windows-specific bug that prevented progress indicators from working.

- Included a start-up message about documentation, demos, and read-write directory permissions.

- Added a note about bidirectional edges in directed networks to the documentation for "getLinkCommunities".



linkcomm 1.0-1
==============

- Windows binaries released after fixing bugs related to file reading and writing.



linkcomm 1.0-0
==============

- Function-complete version of linkcomm uploaded onto CRAN.